Research-Programmer starting with (bio)physical-science simulation, adding AI study and years of Knowledge-Engineering work as well (edu/gov/com).
Focus on Knowledge-Based aids, for process improvement to teaching. AI: Knowledge-Representation and Reasoning, Rules, Kn-Acq, NLP, ML, ...
Develop startup idea/s, starting with working on a ProofOfConcept for Patient DataMiningCluster patent application that I helped start at ucsf.edu. Some eco-simulation in Lisp, and SemWeb (industrial) IoT investigation.
Conceptually annotate study material & tests for automated remediation, instrument classroom to learn from use [Hadoop, Lisp, KM]
Medical-Informatics research (relating to clinical-trails) in Lisp/KM, and Natural-Language-Processing in Java/etc; paper with Stanford group; ontology dev/use [Lisp, KM, ..]
mindbox.com 3/02-10/02. [used Art*Enterprise] See: Ocwen_Mindbox Worked up to half-time for cas.dis.anl.gov 5/03-5/04 [Java Simulation] Worked full-time 8/03-~05(verizon)labs.gte.com, Model-Based-Diagnosis on a national scale. [Art *Enterprise] See: aaai.org/Papers/IAAI/1996/IAAI96-287.pdf Bioinformatics/control contract 11/04-12/05 [CLIPS&Protege.stanford.edu/Java/DB] Control of perfusion pumps on light microscope sample, monitoring incl. Machine-vision, Bio-ontology/reasoning/Kn-mngt for the experiment setup. & Grant proposal work. Worked for CME.com 2/06-06/06 (re)organizing trade-data validation code. [CLIPS/Jess] Signal-Processing/Machine-Learning (startup) 06/06-[Lisp/etc] Hospital Informatics/Machine-Learning ghx.com 02/07-05/07-[Lisp], MachineLearning speedup for financial-scientific [Lisp]
University of Illinois Urbana-Champaign, IL Organize many levels of a very large knowledge based simulation projects. Brought over 18 programmers together to deliver a coherent product. Ran weekly (sub)group meetings, down to help solving any problem. Hiring, demo, design, install trips, prototyping to lead project direction. Taught group of 6 how to use a Rule-Based-shell for a reasoner-rewrite in Art*Enterprise. Projects included: Simulation-based, Intelligent Tutoring System (ITS) & Real-Time control system. Being used in classroom, real life testing, presented at IAAI99 'Automated Instructor Assistant for Ship Damage Control' The system teaches Navy officers how to save a simulated ship in crisis. A variant was developed to catch real-time crisis conditions and suggest solutions www.dwilkins.org/members.htm
Helped develop and install their very first product (Intelligent email reply). Worked between development and consulting. Helped on several Knowledge-Based business applications. Helped with several deployed Knowledge-Based business applications (ie. financial: mortgage, web based job finder). [Art*Enterprise]See: http://www.brightware.com/eservice_solutions/ More recently I worked 1/2year for the new version of the company: Mindbox.
Wrote Lisp code (mainly GUI) for Qualitative Research Group. Learned more about Qualitative/Quantitative Simulation, Model-Based Reasoning, Intelligent-Tutoring-Systems, & general Lisp programming. See: http://www.qrg.northwestern.edu/projects/NSF/Cyclepad/aboutcp.htm
Wrote fielded Expert System by myself at the end of grad-school. [in Lisp rule-shell then CLIPS] Prototyped communication & control of distributed simulation. [in CLIPS PVM etc] Agent wrapping of simulations with CLIPS+PVM, to describe then mix and match them. Also used C++/Smalltalk/FORTRAN with PVM; Other work as needed. Algo/Viz/Etc. Written up in a book about innovative distributed object application. See: http://www.dis.anl.gov/DEEM HLAsim http://www.dis.anl.gov/DEEM/DIAS mike.bobak.googlepages.com/diaswp.pdf _More recently I worked part-time for the new subgroup of dis: cas.dis.anl.gov.
Wrote molecular graphics package used in classes & for publications. [in C] Used machine-learning techniques for protein structure prediction.
Wrote thesis on Knowledge-Based Simulation Environment. [Lisp/OPS5/C] Overseen by heads of the NCSA CompBio group and head of Biophysics at the time. see: web.bilkent.edu.tr/ncsa/Apps/CBdir.html
Suggested scientific software path for Software Tools Group of NCSA; Wrote molecular viz code for a professor. Wrote testing code for Global Info Systems Tech. [in C]
Maintained financial databases & daily report information. Organized worldwide mailing system. Wrote statistics code for stock predictions. [MUMPS and Maths-package]
Provided research support from start to finish. [FORTRAN] Wrote and ran computer simulation code, compared output with field data. Did field measurements to back up predictions. (Team/Self; Local/US/World-wide) My work went into several published papers. GRASS: grass.fbk.eu
MS Biophysics & Computational Biology with AI, 1990-93
BS Physics, BS Biophysics, 1983-88, dept. distinction
| 19+ years overall | Rule-Based
KnRep& |
Libs: |
Databases: |
Operating-Systems: |
|
| C(6+ years) FORTRAN(6+ yrs) |
Smalltalk (~1 yr) C++(1+yr) |
OPS5, Prolog, GoldWorks(<1yr) | MS-Jet/SQL, MySQL |
NeXTSTEP, MS(NT..XP) (8+ yrs) |
|
| Scheme (~1 yr) MUMPS (1/2yr).. |
Python(< 1yr), Java (1+ yr) |
CLIPS(4+yrs), |
PostgreSQL, ORDB |
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| Knowledge-Machine(3+years), JESS(1 yr), Protege(6+yrs) | WS:Tomcat/Axis SOAP/REST |
Graph&triple persistance |
OS-X.Darwin(10+ years) |
